AlleleAtlas

AlleleAtlas is a web app (with optional desktop uploader) for conservation genetics teams who are drowning in scattered spreadsheets, lab outputs, and inconsistent metadata. It standardizes sample metadata, ingests common marker formats (SNP panels, microsatellites, mtDNA haplotypes), and produces decision-ready outputs: relatedness/inbreeding summaries, genetic diversity trends over time, and simple “what happens if” translocation scenarios. It’s not a full bioinformatics pipeline replacement; it focuses on the last mile—turning results into management recommendations that can be audited and explained to funders and regulators. An AI assistant helps draft plain-language reports, flags suspicious metadata (duplicate IDs, impossible collection dates, location outliers), and suggests minimal next sampling to reduce uncertainty. The app stores provenance so every chart and recommendation links back to raw files and parameters, reducing disputes and rework.